No. |
Topic |
Section/Problems |
Due Date:
on each day
(
No
late homework ) |
ALL
problems that involve plotting or tabulating iterations must
be computer-generated.
Attendance: The instructor reserves the right
to record class attendance and use it as part of the final grade. If
lateness becomes a common problem, admission into the classroom may
be refused. Please TURN OFF all electronic devices, cell phones and
laptops, during class.
Academic Integrity
All work that you complete in this class should be your own. In
particular, exams, homework, and quizzes,
are considered individual work. Any
form of cheating (including copying someone else work or allowing
to be copied) will result in an "F" in the final grade
of the course and a referral to the Dean for further action.
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1. |
Discrete one-species models
and exponential growth |
32: 2, 3, 12
34: 3, 7, 14, 16 |
|
2. |
Density-dependent growth, qualitative
methods (phase-plane), logistic equation |
37: 2, 3, 5
38: 3,
39: 1,4
|
|
Population dynamics / model fitting.
Data:
bacteria.dat
bombay.dat
doves.dat
duckweed.dat
houston.dat
kenya.dat
lupine.dat
usapop.dat
worldpop.dat
yeast.dat |
MATLAB Codes:
algebraic_fit_exp.m
houston_fit.m
logistic_fit.m
Download homework |
3. |
Review (max 5 pages, single column,
one side) of research article:
Leading Paragraph
Briefly describe the goal and main contributuions of the paper. Make
reader become interested in the paper.
Technical Section
Describe the methodology, experimental data and derivation of relevant
models. Discuss interesting results.
Conclusions
Summarize main ideas and results. |
Download article |
|
4. |
Linear Systems, Lotka Volterra
Models |
45: 1(b), 1(j), 1(k)
46: 4
49: 1 |
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5. |
Qualitative Analysis of Competing
Species Models |
50: 8, 13
54: 2(a)-(d), 6, 11
|
|
6. |
Review (max 5 typed pages, single
column, one side) of research article:
Leading Paragraph
Briefly describe the goal and main contributuions of the paper.
Make reader become interested in the paper.
Technical Section
Describe the methodology, experimental data and derivation of
relevant models. Discuss interesting results.
Conclusions
Summarize main ideas and results. |
Ansatz
library for global modeling with a structure selection.
Download
article
|
|
|
|
I.
In-class
Sections 32-54
(only those covered in class) |
Monday,
October 19
(no class October 21) |
|
Wednesday,
October 28 |
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7. |
Stability Analysis of Pattern
Forming Systems in Spatially Extended Models |
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8. |
Review (max 5 typed pages, single
column, one side) of research article:
Leading Paragraph
Briefly describe the goal and main contributuions of the paper.
Make reader become interested in the paper.
Technical
Section
Describe the methodology, experimental data and derivation of
relevant models. Discuss interesting results.
Conclusions
Summarize main ideas and results. |
Review of article: Emergence and Evolution
of Patterns
Download article |
|
9. |
Computational Work: Pattern
formation on a Discrete 2D Model |
|
|
10. |
Review (max 5 typed pages, single
column, one side) of research article:
Leading Paragraph
Briefly describe the goal and main contributuions of the paper.
Make reader become interested in the paper.
Technical
Section
Describe the methodology, experimental data and derivation of
relevant models. Discuss interesting results.
Conclusions
Summarize main ideas and results. |
Review of article: Cellular pattern formation
in circular domains
Download article |
|
|
Stochastic Models |
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FINAL
EXAM |
I.
In-class
Spatially Extended Models |
Wednesday,
December 2
(no class November 30) |
|
Wednesday,
December 9, 4PM |